Overview of Help-Pages
Overview of Genomatix Help Pages
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Genomatix Software Suite
Introduction
Release Notes
NGS Mapping
(only available on GGA)
Genomatix Mapper
Mapping Reads to the Genome
Mapping Reads to the Small RNA Library
Mapping of Bisulfite Sequencing Data
Release Notes
NGS Analysis
(only available on GGA)
Introduction
Complete Workflow for ChIPSeq Analysis / Peak Finding
NGSAnalyzer
MACS/MACS2
SICER
Evaluation with Control Data
Expression Analysis for RNASeq
Principal Component Analysis
microRNA Analysis
Small Variant Detection
Structural Variant Detection
Release Notes
Genes & Genomes
Available Genomes and Statistics
Source of Elements
Genome Annotation (ElDorado)
Annotation & Analysis
Detailed Transcript Info
Tissue Profiles
SNP Analysis
Annotated Sequence
Detailed Mapping
Alternative Transcripts
Comparative Genomics
More Gene Info
Literature Analysis
Public Data in Genome Browser & GenomeInspector
Genome Browser
Gene2Promoter
Large Scale Promoter Extraction
Annotation and Statistics
Search for orthologous regions
Variant Analysis
GenomeInspector
Enhancer Filter
Release Notes
Gene Regulation
Introduction
Supply of DNA Sequences
DNA Sequence Formats
Scores
MatInspector
Matrix Information
MatInspector Algorithm
Library Statistics
Release Notes
Common TF sites
MatBase
Content Statistics
Content Release Notes
GEMS Launcher Menu
DiAlign TF
FrameWorker
ModelInspector
Model Information
Search for phylogenetically conserved promoter models
Definition of Weight Matrices (MatDefine)
Weight Matrix
CoreSearch
FastM
SNPInspector
SequenceShaper
PromoterInspector
SMARTest
Primer Search
DiAlign
ExonMapper
Overrepresented TFs
Release Notes
Literature & Pathways
GePS (Pathway System)
GeneRanker
LitInspector
LitInspector Background
LitInspector Quality
Gene-TF Analysis
Release Notes
Genomatix Tools
DNA Sequence Tools
BED File Tools
BED File Format
File import from the GGA
BAM File Tools
BAM File Format
VCF File Tools
GeneID Tools
List Comparison
Release Notes
Projects & Account
Job Queuing
Projects & Results
Personal Matrix Library & Subsets
Personal Model Library & Subsets
Tutorials
Short Application Examples
Webinar Recordings
FAQs
Frequently asked scientific questions
Frequently asked technical questions
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